| 1 |
High-Throughput Simulations Reveal Membrane-Mediated Effects of Alcohols on MscL Gating
Melo MN, Arnarez C, Sikkema H, Kumar N, Walko M, Berendsen HJC, Kocer A, Marrink SJ, Ingolfsson HI
Journal of the American Chemical Society, 139(7), 2664, 2017 |
| 2 |
An application of flexible constraints in Monte Carlo simulations of the isobaric-isothermal ensemble of liquid water and ice Ih with the polarizable and flexible mobile charge densities in harmonic oscillators model
Saint-Martin H, Hess B, Berendsen HJC
Journal of Chemical Physics, 120(23), 11133, 2004 |
| 3 |
Computer simulation of urea-water mixtures: A test of force field parameters for use in biomolecular simulation
Smith LJ, Berendsen HJC, van Gunsteren WF
Journal of Physical Chemistry B, 108(3), 1065, 2004 |
| 4 |
Molecular dynamics simulation of the effect of hydrophobic cosolutes on the neutral hydrolysis of an activated ester
Rispens T, Lensink MF, Berendsen HJC, Engberts JBFN
Journal of Physical Chemistry B, 108(17), 5483, 2004 |
| 5 |
Photoactivation of the photoactive yellow protein: Why photon absorption triggers a trans-to-cis lsomerization of the chromophore in the protein
Groenhof G, Bouxin-Cademartory M, Hess B, De Visser SP, Berendsen HJC, Olivucci M, Mark AE, Robb MA
Journal of the American Chemical Society, 126(13), 4228, 2004 |
| 6 |
Flexible constraints: An adiabatic treatment of quantum degrees of freedom, with application to the flexible and polarizable mobile charge densities in harmonic oscillators model for water
Hess B, Saint-Martin H, Berendsen HJC
Journal of Chemical Physics, 116(22), 9602, 2002 |
| 7 |
Dynamic conformations of flavin adenine dinucleotide: Simulated molecular dynamics of the flavin cofactor related to the time-resolved fluorescence characteristics
van den Berg PAW, Feenstra KA, Mark AE, Berendsen HJC, Visser AJWG
Journal of Physical Chemistry B, 106(34), 8858, 2002 |
| 8 |
A mobile charge densities in harmonic oscillators (MCDHO) molecular model for numerical simulations: The water-water interaction
Saint-Martin H, Hernandez-Cobos J, Bernal-Uruchurtu MI, Ortega-Blake I, Berendsen HJC
Journal of Chemical Physics, 113(24), 10899, 2000 |
| 9 |
Molecular dynamics simulations of dodecylphosphocholine micelles at three different aggregate sizes: Micellar structure and chain relaxation
Tieleman DP, van der Spoel D, Berendsen HJC
Journal of Physical Chemistry B, 104(27), 6380, 2000 |
| 10 |
Properties of adsorbed water layers and the effect of adsorbed layers on interparticle forces by liquid bridging
Wensink EJW, Hoffmann AC, Apol MEF, Berendsen HJC
Langmuir, 16(19), 7392, 2000 |
