Efficient use of water and energy resources are significant requirements for increasing irrigated rice productivity. However, the ever increasingly complex interplay between energy, water and agriculture in feeding both machinery and people, respectively, plus the added impact on and of climate change, have significant implications on the management of our natural resources. This paper holistically analysed a rice-dominated gravity-fed irrigation system using the Upper Pumpanga River Integrated Irrigation System (UPRIIS) in Central Luzon, the Philippines as demonstration example to quantify the water, energy and economic implications of water reuse at five different spatial scales. Water reuse was determined through daily measurements of all surface water inflows and outflows, rainfall, evapotranspiration, and the quantities of water internally reused through check dams and shallow pumping, and aggregated into seasonal totals for five spatial scales during the dry season of 2001. Energy auditing was later used to evaluate the energy implications of water reuse. Results show that similar to 30% of the total surface water applied was reused by internal check dams and pumping from shallow groundwater. Across the five spatial scales, water productivity with water reuse was always higher than without water reuse, which reflects the significance of water reuse. The cost-benefit ratio indicates enhanced rice profitability at all five spatial scales with and without water reuse. However, economic benefits of water reuse were lower than economic benefits from surface water, which was mainly due to the higher costs of pumping. Irrigation requires a significant expenditure of fossil energy both for pumping and delivering water to crops. Total energy inputs of water reuse were 28% higher than the energy inputs without water reuse, which was mainly attributed to higher diesel energy inputs. Whilst water reuse contributes significantly to water productivity across the five spatial scales, it does increase energy use due to pumping. Our holistic analysis indicated a tradeoff between yield and energy use. Achieving higher water productivity would require additional use of fossil energy, which in turn could increase the energy use competition and decrease economic returns. Given the increasing global concerns about climate change and sustainable energy use, an optimal combination of water and energy use is absolutely essential. (C) 2013 Elsevier Ltd. All rights reserved.