Journal of Chemical Physics, Vol.107, No.3, 879-893, 1997
Fast, Accurate Semiempirical Molecular-Orbital Calculations for Macromolecules
A detailed review of the semiempirical divide-and-conquer (D&C) method is given, including a new approach to subsetting, which involves dual buffer regions. Comparisons are drawn between this method and other semiempirical macromolecular schemes. D&C calculations are carried out using a basic 32 Mbyte memory workstation on a variety of peptide systems, including proteins containing up to 1960 atoms. Aspects of storage and SCF convergence are addressed, and parallelization of the D&C algorithm is discussed.
Keywords:DENSITY-MATRIX;SCF ITERATION;SYSTEM-SIZE;CONVERGENCE;RESOLUTION;COMPUTATIONS;PARAMETERS;MODEL