Bio-remediation technologies often offer efficiency, cost and environmental impact benefits against physico-chemical technologies. Concerning the remediation of radionuclide-containing water, a few bio-based technologies have been proposed but none is currently operational in highly radioactive environments. A new radio-tolerant micro-alga, isolated from a nuclear facility, possesses properties that offer new decontamination prospects for the nuclear industry or for the clean-up of environmental water. A pilot-scale treatment unit based on this alga is currently under development for the decontamination of radioactive water. It includes separation and/or concentration steps relying on membrane filtration. This work aims at verifying the feasibility of microfiltration as separation step for the targeted algae separation. Recommendations about the choice of operating conditions limiting and/or controlling the membrane fouling are provided with the objective to enhance the separation efficiency. Lab-scale dead-end filtration tests were implemented and the key factors involved in the separation performances were investigated. Membrane characteristics, biomass composition, and hydrodynamic conditions were considered. Organic membranes provided adequate filtration performance. Membrane fouling was essentially induced by a rapid reversible algae deposit and to a lesser extent by irreversible pore blockage caused by smaller particles and dissolved organic matter. To cancel the reversible fouling, hydrodynamic actions such as stirring and back-flush efficiently prevented algae deposit, allowing higher filtration productivity. This study demonstrates the feasibility of membrane separation for micro-algae harvesting at laboratory-scale and specifies the suitable working conditions. (C) 2014 Elsevier B.V. All rights reserved.