An attractive alternative method to add new functionalities such as biocompatibility due to the micro- and nanoscaled modification of surfaces is offered by UV-modified polymers. The aim of this study was to evaluate the effect of the UV light functionalization on two polymers, poly(ethylene terephthalate) (PET) and polyurethane (PU) films, by means of atomic force microscopy (AFM), Fourier transform infrared-attenuated total reflectance (FTIR-ATR), and contact angle measurements. Thus, the UV-irradiation activates the polymers surface by breaking some chemical bonds and generation of new functional groups on the surface. This process can be controlled by the irradiation time. The topography provides the formation of superposed 'nap' and 'wall-type' structures on both untreated and treated samples. The surface parameters were found to depend on the polymer films before and after irradiation. The immobilization of collagen on PET surface was confirmed by X-ray photoelectron spectroscopy measurements and for PU surface was proved by FTIR-ATR. First technique suggests an increase of the nitrogen content at longer UV exposure time, and the second one reveals the appearance of the protein Amide I band. Supplementary, AFM measurements clearly revealed the presence of collagen attached on the polymer surface. Thus, these new UV-irradiated polymers are promising materials in our further attempts to obtain new biofunctionalized surfaces.