Biochemical and Biophysical Research Communications, Vol.466, No.1, 28-32, 2015
Structural analysis of CXCR4-Antagonist interactions using saturation-transfer double-difference NMR
CXCR4 is a GPCR involved in leukocyte trafficking. Small molecule antagonists of the receptor may treat inflammatory disease, cancer and HIV. Here we probe the binding of a tetrahydroisoquinoline-based antagonist (TIQ-10) to OCCR4 using saturation transfer double-difference (STDD) NMR. STDD spectra were acquired using extracts from Chinese Hamster Ovary cells expressing membrane-embedded CXCR4. The experiments demonstrate competitive binding between TIQ-10 and established antagonists and provide the TIQ-10 - CXCR4 binding epitope. Molecular modeling of TIQ-10 into the binding pocket provides a pose consistent with STDD-derived interactions. This study paves the way for future investigations of GPCR-ligand interactions in a biological milieu for use in chemical biology, biochemistry, structural biology, and rational drug design. (C) 2015 Elsevier Inc. All rights reserved.
Keywords:G-protein-coupled receptors;NMR spectroscopy;Saturation transfer difference;Ligand-receptor interactions;C-X-C chemokine receptor 4