The performance of pressure retarded osmosis (PRO) processes is significantly limited by membrane fouling. This study systematically investigated PRO scaling by silica, which is one of the most common salts causing membrane scaling. In particular, the effect of silica concentration, the initial water flux, the chemistry of feed solution (FS)/draw solution (DS), and the type of membrane were studied in the PRO mode of operation. It has been observed that a low silica concentration (e.g., 10 mg/L SiO2) could even cause membrane scaling during a PRO process. The rate and extent of the scaling was mainly governed by the internal concentration of silica in the membrane support layer and the solution chemistry of the FS/DS. The results suggested that the scaling could be mitigated by decreasing the internal concentration through the reduction of bulk silica concentration, the optimization of operating water flux, and the decrease in membrane structural parameter. The structural parameter seems to play a dominant role in PRO scaling by silica than the membrane materials and other physico-chemical properties. In addition, silica scaling can be controlled by lowering the pH of the FS and/or DS. For the first time, it has been demonstrated that utilizing an acidic DS was highly effective in controlling PRO scaling, which can be attributed to the low local pH in the membrane support layer as a result of the internal concentration polarization (ICP) of the reversely diffused H+. This method opens a new dimension for PRO scaling/fouling control.