Journal of the American Chemical Society, Vol.116, No.25, 11512-11521, 1994
Ab-Initio Studies of Neutral and Protonated Triglycines - Comparison of Calculated and Experimental Gas-Phase Basicity
Ab initio Hartree-Fock (HF) molecular orbital calculations were carried out for triglycine and its six singly-protonated species (at the three different nitrogen and carbonyl oxygen sites). Minimum-energy structures were first determined using the 3-21G basis set with full geometry optimizations; single-point calculations were next performed in the larger 6-31G* basis set to gain better electronic protonation energies. Based on the 6-31G*//3-21G electronic protonation energies, the relative basicity of different atomic sites is as follows : amino N > amide carbonyl O > carboxylic carbonyl O > amide N. To obtain proton affinity (PA) and gas-phase basicity (GB) values for triglycine, electronic energies at the 6-31G*//6-31G* level and zero-point and thermal energies at the 3-21G//3-21G level were calculated for the most stable structures of the neutral and amino N-protonated species. The resulting theoretical PA and GB are 227.9 and 219.6 kcal/mol; the latter is in close agreement with the experimental GB of 218.5 +/- 2.4 kcal/mol which was obtained by proton transfer reactions in a Fourier transform ion cyclotron resonance mass spectrometer. Among the calculated structures, several ring forms (C-5, C-7, C-10 and C-11) arising from intramolecular hydrogen bonding are identified. A novel intramolecular interaction between an amide carbonyl oxygen atom and a trivalent carbon atom is also uncovered. Effects of H-bonds and the geometry of the relevant protonated peptide bond on the relative stability of protonated species are discussed in detail. The 6-31G*//3-21G approach is shown to be a practical alternative to 6/31G*//6-31G* for obtaining reasonable theoretical estimates of GB with relative economy. Finally, comparisons are made between experimental and theoretical data on the thermodynamic and structural aspects of the protonation of triglycine.
Keywords:COLLISION-INDUCED DISSOCIATION;TANDEM MASS-SPECTROMETRY;PEPTIDES;AFFINITIES;GLYCINE;SPECTRA;IONS