화학공학소재연구정보센터
Journal of the American Chemical Society, Vol.119, No.13, 3057-3067, 1997
Coenzyme B-12 Chemical Precedent Studies - Probing the Role of the Imidazole Base-on Motif Found in B-12-Dependent Methylmalonyl-CoA Mutase
Adenosylcobinamide (AdoCbi(+)) plus N-methylimidazole (N-MeIm), [AdoCbi . N-MeIm]+BF4-, has been studied with the goal of providing a chemical precedent for the benzimidazole base-off, protein histidine base-on form of adenosylcobalamin (AdoCbl, also coenzyme B-12) found in the recent X-ray crystallographic structural study of methylmalonyl-CoA (MMCoA) mutase. Specifically, the axial-base binding K-assoc and associated Delta H and Delta S thermodynamic parameters for [AdoCbi . N-MeIm]+BF4- have been obtained as well as its Co-C thermolytic cleavage products and kinetic parameters. The thermodynamic studies reveal that imidazole is unique among the aromatic nitrogenous bases tested, with a more favorable Delta H = -7.8 +/- 0.4 kcal/mol but a compensatingly less favorable Delta S = -28 +/- 1 eu when binding to AdoCbi(+). A stronger, shorter Co-N (N-MeIm) bond is implied for [AdoCbi . N-MeIm](+) (i.e., vs pyridine as the axial base). The product studies reveal that imidazole changes the mode of Co-C cleavage from greater than or equal to 98% homolysis (for the appended 5,6-dimethylbenzimidazole in AdoCbl) to similar to 50% homolysis and similar to 50% abiological heterolysis for [AdoCbi . N-MeIm](+). The kinetic studies demonstrate that both Co-C homolysis and heterolysis are accelerated by the record amounts of 8- and 350-fold, respectively, vs the reference point of 5,6-dimethylbenzimidazole base-on AdoCbl (and by a record 870- and 30 700-fold, respectively vs the reference point of the solvent ethylene glycol as the axial base, [AdoCbi . ethylene glycol](+)). The biological significance of these findings is discussed, notably (i) that the MMCoA mutase subclass of B-12-dependent enzymes must either (a) utilize or (b) prevent Co-C heterolysis and (ii) the expectation that a long, "ideal" length Co-N(imidazole) is one key way the enzyme can inhibit Co-C heterolysis as well as accelerate Co-C homolysis. Also discussed are the steric and electronic differences of imidazole vs pyridine axial-ligands, including the literature of imidazole’s pi-bonding interactions. Finally, a brief summary of the needed [AdoCbi . base](+) and [Co(II)Cbi . base](+) structural, computational, and other additional studies is presented.