Scanning tunneling microscopy measurements conducted on pure liquid crystals and liquid crystals in combination with the dyes perylene-tetracarboxylic-dianhydride (PTCDA) and phthalocyanine (Pc), all adsorbed on highly oriented pyrolytic graphite (HOPG), are being reported on. The liquid crystal octylcyanobiphenyl (8CB) was used as a solvent for the dyes, allowing the preparation of ordered dye layers in a very simple war. A combination of vapor deposition of PTCDA and liquid deposition of 8CB provided films, where 8CB and PTCDA are embedded in each other on a small length scale. The samples were prepared in two different ways yielding either 8CB islands within a PTCDA monolayer or PTCDA islands surrounded by 8CB. The Pc films on HOPG exhibit a hexagonal molecular lattice that could be related to the lattice of the graphite substrate and for which a structural model is proposed. For dodekylcyanobiphenyl (12CB) on HOPG the ordering in unit cells containing 10 rather than 8 molecules is reported for the first time.