Compared to lipid extraction from algae, little work has been performed for cyanobacteria. In this article it is aimed to show high lipid accumulation potential of Synechococcus sp., Cyanobacterium aponinum and Phormidium sp. cells in BC-11 medium. Four different pH values (6-9) and NaNO(3) (0.25, 0.5, 1.0, 1.5 g/L) concentrations were examined at different incubation days to discover the highest lipid accumulation. The maximum lipid content could be achieved in the medium containing 0.25 g/L NaNO(3) at pH 7 for Synechococcus sp., pH 8 for C aponinum and pH 9 for Phormidium sp. after 15 days. The maximum lipid contents and C16 and C18 methyl ester yields were measured as 42.8% and 46.9% for Synechococcus sp., 45.0% and 67.7% for C aponinum, 38.2% and 90.6% for Phormidium sp. The saturated compounds were 74.5%, 77.9%, 84.7% for Synechococcus sp., C aponinum and Phormidium sp., respectively. These crude lipids could be promising feedstock for biodiesel production. (C) 2011 Elsevier Ltd. All rights reserved.