Six different types of ecological water bodies were evaluated to assess their potential to generate bioelectricity using benthic type fuel cell assemblies. Experiments were designed with various combinations of electrode assemblies, surface area of anode and anodic materials. Among the 32 experiments conducted, nine combinations evidenced stable electron-discharge/current. Nature, flow conditions and characteristics of water bodies showed significant influence on the power generation apart from electrode assemblies, surface area of anode and anodic material. Stagnant water bodies showed comparatively higher power output than the running water bodies. Placement of cathode on algal mat (as bio-cathode) documented several folds increment in power output. Electron-discharge started at 1000 Omega resistance in polluted water bodies (Nacaharam cheruvu, Hussain Sagar lake Musi river), whereas, in relatively less polluted water bodies (Uppal pond/stream, Godavari river) electron-discharge was observed at low resistances (500/750 Omega). (C) 2008 Elsevier Ltd. All rights reserved.